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CHROM POS VCFID REF ALT FORMAT R03 R04 R05
Chr01 48397 Chr01__48397 G A GT:AD:DP:GQ:PL 0/0:12,0:12:27:0,27,405 0/0:8,0:8:15:0,15,225 0/0:14,0:14:27:0,27,405
Chr01 48473 Chr01__48473 T C GT:AD:DP:GQ:PL 0/0:10,0:10:15:0,15,225 0/0:13,0:13:33:0,33,495 0/0:6,0:6:6:0,6,90
Chr01 48479 Chr01__48479 G A GT:AD:DP:GQ:PL 0/0:10,0:10:6:0,6,90 0/0:12,0:12:27:0,27,405 0/0:6,0:6:3:0,3,45
Chr01 48689 Chr01__48689 T C GT:AD:DP:GQ:PL 0/0:13,0:13:30:0,30,450 0/0:16,0:16:36:0,36,540 0/0:11,0:11:18:0,18,270
Chr01 48815 Chr01__48815 G A GT:AD:DP:GQ:PL 0/0:10,0:10:24:0,24,360 0/0:16,0:16:36:0,36,540 0/0:7,0:7:18:0,18,270
Chr01 49004 Chr01__49004 G T GT:AD:DP:GQ:PGT:PID:PL 0/0:7,0:7:9:.:.:0,9,135 0/0:20,0:20:45:.:.:0,45,675 0/0:11,0:11:18:.:.:0,18,270
Chr01 49012 Chr01__49012 T C GT:AD:DP:GQ:PGT:PID:PL 0/0:8,0:8:12:.:.:0,12,180 0/1:15,6:21:99:.:.:175,0,599 0/0:11,0:11:15:.:.:0,15,225
Chr01 49139 Chr01__49139 C A GT:AD:DP:GQ:PL 0/0:14,0:14:30:0,30,450 0/0:10,0:10:24:0,24,360 0/0:10,0:10:21:0,21,315
Chr01 49274 Chr01__49274 G A GT:AD:DP:GQ:PGT:PID:PL 0/0:12,0:12:24:.:.:0,24,360 0/0:14,0:14:33:.:.:0,33,495 0/0:13,0:13:24:.:.:0,24,360
Chr01 49386 Chr01__49386 T C GT:AD:DP:GQ:PGT:PID:PL 0/1:9,8:17:99:.:.:251,0,325 0/1:7,8:15:99:.:.:206,0,236 0/0:10,0:10:15:.:.:0,15,225
Chr01 49411 Chr01__49411 G C GT:AD:DP:GQ:PL 0/0:12,0:12:24:0,24,360 0/0:15,0:15:33:0,33,495 0/0:9,0:9:12:0,12,180
Chr01 49443 Chr01__49443 G A GT:AD:DP:GQ:PL 0/0:16,0:16:27:0,27,405 ./.:17,0:17:.:. 0/0:1,0:1:3:0,3,42
Chr01 49466 Chr01__49466 T A,G GT:AD:DP:GQ:PGT:PID:PL 0/0:14,0,0:14:33:.:.:0,33,495,33,495,495 0/1:10,10,0:20:99:.:.:319,0,323,349,354,703 0/0:1,0,0:1:3:.:.:0,3,42,3,42,42
Chr01 49505 Chr01__49505 C G GT:AD:DP:GQ:PL 0/0:15,0:15:36:0,36,540 0/0:20,0:20:39:0,39,585 0/0:2,0:2:6:0,6,84
Chr01 49568 Chr01__49568 C T GT:AD:DP:GQ:PGT:PID:PL 0/0:14,0:14:24:.:.:0,24,360 0/0:14,0:14:24:.:.:0,24,360 0/0:5,0:5:15:.:.:0,15,197
Chr01 49597 Chr01__49597 T G GT:AD:DP:GQ:PGT:PID:PL 0/0:13,0:13:30:.:.:0,30,450 0/0:10,0:10:18:.:.:0,18,270 0/0:5,0:5:15:.:.:0,15,197
Chr01 49766 Chr01__49766 C G GT:AD:DP:GQ:PL 0/1:13,4:17:99:116,0,446 0/0:12,0:12:18:0,18,270 1/1:0,10:10:30:394,30,0
Chr01 49812 Chr01__49812 C T GT:AD:DP:GQ:PGT:PID:PL 0/0:18,0:18:42:.:.:0,42,630 0/1:4,7:11:99:0|1:49812_C_T:263,0,147 0/0:10,0:10:18:.:.:0,18,270
Chr01 49844 Chr01__49844 T C GT:AD:DP:GQ:PGT:PID:PL 1/1:0,17:17:51:.:.:686,51,0 1/1:0,10:10:30:.:.:418,30,0 1/1:0,10:10:30:.:.:384,30,0
Chr01 49895 Chr01__49895 G T GT:AD:DP:GQ:PL 0/0:18,0:18:36:0,36,540 0/0:8,0:8:12:0,12,180 0/0:14,0:14:33:0,33,495